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John R True
Department of Ecology and Evolution, State University of New York at Stony Brook, Stony Brook, United States of America

Faculty Member: Developmental Biology > Developmental Evolution [ since 9 September 2002 ]
[ Evaluations ]
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Evaluations

Decoupled differentiation of gene expression and coding sequence among Drosophila populations.
Kohn MH, Shapiro J, Wu CI
Genes Genet Syst 2008 Jun 83(3):265-73 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 12 Aug 2008

The evolution of courtship behaviors through the origination of a new gene in Drosophila.
Dai H, Chen Y, …, Du W, Long M
Proc Natl Acad Sci U S A 2008 May 27 105(21):7478-83 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John True
Evaluated 3 Jul 2008

Variation and evolution of male sex combs in Drosophila: nature of selection response and theories of genetic variation for sexual traits.
Ahuja A, Singh RS
Genetics 2008 May 179(1):503-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John True
Evaluated 29 May 2008

Drosophila mounts a unique immune response to Sigma rhabdovirus.
Tsai CW, McGraw EA, …, Dietzgen RG, Hogenhout SA
Appl Environ Microbiol 2008 Mar 31 [abstract on PubMed] [related articles] [full text]
Selected by | John True
Evaluated 18 Apr 2008

Sex Combs are Important for Male Mating Success in Drosophila melanogaster.
Ng CS, Kopp A
Behav Genet 2008 Mar 38(2):195-201 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John True
Evaluated 7 Mar 2008

How Drosophila change their combs: the Hox gene Sex combs reduced and sex comb variation among Sophophora species.
Randsholt NB, Santamaria P
Evol Dev 2008 Jan-Feb 10(1):121-33 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John True
Evaluated 13 Feb 2008

Deriving structure from evolution: metazoan segmentation.
François P, Hakim V, Siggia ED
Mol Syst Biol 2007 3:154 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 9 Jan 2008

Genomic regulatory blocks underlie extensive microsynteny conservation in insects.
Engström PG, Ho Sui SJ, …, Becker TS, Lenhard B
Genome Res 2007 Dec 17(12):1898-908 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John True
Evaluated 29 Nov 2007

Surprising complexity of the ancestral apoptosis network.
Zmasek CM, Zhang Q, Ye Y, Godzik A
Genome Biol 2007 Oct 24 8(10):R226 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 7 Nov 2007

Transforming the architecture of compound eyes.
Zelhof AC, Hardy RW, Becker A, Zuker CS
Nature 2006 Oct 12 443(7112):696-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John True
Evaluated 7 Aug 2007

Twin intromittent organs of Drosophila for traumatic insemination.
Kamimura Y
Biol Lett 2007 Aug 22 3(4):401-4 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John True / Mike Ritchie / Michael Siva-Jothy
Evaluated 22 Jun 2007

Host plant specialization driven by sexual selection.
Quental TB, Patten MM, Pierce NE
Am Nat 2007 Jun 169(6):830-6 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John True
Evaluated 17 May 2007

Population differentiation in the beetle Tribolium castaneum. II. Haldane'S rule and incipient speciation.
Demuth JP, Wade MJ
Evolution Int J Org Evolution 2007 Mar 61(3):694-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John True
Evaluated 10 Apr 2007

Mating-induced recombination in fruit flies.
Priest NK, Roach DA, Galloway LF
Evolution Int J Org Evolution 2007 Jan 61(1):160-7 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John True
Evaluated 19 Mar 2007

Octopamine modulates honey bee dance behavior.
Barron AB, Maleszka R, Vander Meer RK, Robinson GE
Proc Natl Acad Sci U S A 2007 Jan 30 104(5):1703-7 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 12 Feb 2007

Evolutionary conservation of domain-domain interactions.
Itzhaki Z, Akiva E, Altuvia Y, Margalit H
Genome Biol 2006 7(12):R125 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 3 Jan 2007

Ancestry of neuronal monoamine transporters in the Metazoa.
Caveney S, Cladman W, Verellen L, Donly C
J Exp Biol 2006 Dec 209(Pt 24):4858-68 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 15 Dec 2006

Multilocus analyses of admixture and introgression among hybridizing Heliconius butterflies.
Kronforst MR, Young LG, Blume LM, Gilbert LE
Evolution Int J Org Evolution 2006 Jun 60(6):1254-68 [abstract on PubMed] [related articles] [order article]
Selected by | John True
Evaluated 29 Aug 2006

The period gene Thr-Gly polymorphism in Australian and African Drosophila melanogaster populations: implications for selection.
Sawyer LA, Sandrelli F, …, Costa R, Kyriacou CP
Genetics 2006 Sep 174(1):465-80 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 31 Jul 2006

Gene regulation divergence is a major contributor to the evolution of Dobzhansky-Muller incompatibilities between species of Drosophila.
Haerty W, Singh RS
Mol Biol Evol 2006 Sep 23(9):1707-14 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True / Artyom Kopp
Evaluated 22 Jun 2006

Does the desaturase-2 locus in Drosophila melanogaster cause adaptation and sexual isolation?
Coyne JA, Elwyn S
Evolution Int J Org Evolution 2006 Feb 60(2):279-91 [abstract on PubMed] [related articles] [order article]
Selected by | John True
Evaluated 26 Apr 2006

Does genetic diversity hinder parasite evolution in social insect colonies?
Hughes WO, Boomsma JJ
J Evol Biol 2006 Jan 19(1):132-43 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John True
Evaluated 14 Mar 2006

Olfactory shifts parallel superspecialism for toxic fruit in Drosophila melanogaster sibling, D. sechellia.
Dekker T, Ibba I, …, Stensmyr MC, Hansson BS
Curr Biol 2006 Jan 10 16(1):101-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John True / Artyom Kopp
Evaluated 7 Feb 2006

Recently evolved genes identified from Drosophila yakuba and D. erecta accessory gland expressed sequence tags.
Begun DJ, Lindfors HA, Thompson ME, Holloway AK
Genetics 2006 Mar 172(3):1675-81 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 13 Jan 2006

Evidence for a one-allele assortative mating locus.
Ortíz-Barrientos D, Noor MA
Science 2005 Dec 2 310(5753):1467 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True / Richard Harrison
Evaluated 12 Dec 2005

Reinforcement drives rapid allopatric speciation.
Hoskin CJ, Higgie M, McDonald KR, Moritz C
Nature 2005 Oct 27 437(7063):1353-6 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John True
Evaluated 16 Nov 2005

The genetic basis for fruit odor discrimination in Rhagoletis flies and its significance for sympatric host shifts.
Dambroski HR, Linn C, …, Roelofs W, Feder JL
Evolution Int J Org Evolution 2005 Sep 59(9):1953-64 [abstract on PubMed] [related articles] [order article]
Selected by | John True
Evaluated 10 Oct 2005

Parallel evolution of chimeric fusion genes.
Jones CD, Begun DJ
Proc Natl Acad Sci U S A 2005 Aug 9 102(32):11373-8 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Manyuan Long / Thomas Mitchell-Olds / John True
Evaluated 6 Sep 2005

Genetics and genomics of Drosophila mating behavior.
Mackay TF, Heinsohn SL, …, Morgan TJ, Rollmann SM
Proc Natl Acad Sci U S A 2005 May 3 102 Suppl 1:6622-9 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 1 Aug 2005

Evolution of salamander life cycles: a major-effect quantitative trait locus contributes to discrete and continuous variation for metamorphic timing.
Voss SR, Smith JJ
Genetics 2005 May 170(1):275-81 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 24 Jun 2005

A rapid shift in a classic clinal pattern in Drosophila reflecting climate change.
Umina PA, Weeks AR, …, McKechnie SW, Hoffmann AA
Science 2005 Apr 29 308(5722):691-3 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Richard Frankham / David Rand / Bryant McAllister / John True
Evaluated 26 May 2005

Sexual reproduction between partners of the same mating type in Cryptococcus neoformans.
Lin X, Hull CM, Heitman J
Nature 2005 Apr 21 434(7036):1017-21 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | June Kwon-Chung / John True
Evaluated 18 May 2005

Functional evolution of a cis-regulatory module.
Ludwig MZ, Palsson A, …, Nathan J, Kreitman M
PLoS Biol 2005 Apr 3(4):e93 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 20 Apr 2005

Natural selection and developmental constraints in the evolution of allometries.
Frankino WA, Zwaan BJ, Stern DL, Brakefield PM
Science 2005 Feb 4 307(5710):718-20 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John Jaenike / John True
Evaluated 24 Feb 2005

Darwinian selection on a selfing locus.
Shimizu KK, Cork JM, …, Awadalla P, Purugganan MD
Science 2004 Dec 17 306(5704):2081-4 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Takashi Hirayama / John True / Andrey Rzhetsky
Evaluated 4 Jan 2005

Functional analyses of tiptop and antennapedia in the embryonic development of Oncopeltus fasciatus suggests an evolutionary pathway from ground state to insect legs.
Herke SW, Serio NV, Rogers BT
Development 2005 Jan 132(1):27-34 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 4 Jan 2005

Quantitative trait loci for sexual isolation between Drosophila simulans and D. mauritiana.
Moehring AJ, Li J, …, Mackay TF, Coyne JA
Genetics 2004 Jul 167(3):1265-74 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 29 Nov 2004

The quantitative genetic basis of male mating behavior in Drosophila melanogaster.
Moehring AJ, Mackay TF
Genetics 2004 Jul 167(3):1249-63 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 29 Nov 2004

Gene duplication and speciation in Drosophila: evidence from the Odysseus locus.
Ting CT, Tsaur SC, …, Patel NH, Wu CI
Proc Natl Acad Sci U S A 2004 Aug 17 101(33):12232-5 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True / Patricia Simpson
Evaluated 8 Sep 2004

Evolutionary changes in cis and trans gene regulation.
Wittkopp PJ, Haerum BK, Clark AG
Nature 2004 Jul 1 430(6995):85-8 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John True / Molly Przeworski
Evaluated 22 Jul 2004

Sexual selection and sex linkage.
Kirkpatrick M, Hall DW
Evolution Int J Org Evolution 2004 Apr 58(4):683-91 [abstract on PubMed] [related articles] [order article]
Selected by | John True
Evaluated 23 Jun 2004

Variable female preferences drive complex male displays.
Coleman SW, Patricelli GL, Borgia G
Nature 2004 Apr 15 428(6984):742-5 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John True
Evaluated 12 May 2004

Genetic changes associated with floral adaptation restrict future evolutionary potential.
Zufall RA, Rausher MD
Nature 2004 Apr 22 428(6985):847-50 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John True
Evaluated 12 May 2004

Common pattern of evolution of gene expression level and protein sequence in Drosophila.
Nuzhdin SV, Wayne ML, Harmon KL, McIntyre LM
Mol Biol Evol 2004 Jul 21(7):1308-17 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 1 Apr 2004

A molecular timescale of eukaryote evolution and the rise of complex multicellular life.
Hedges SB, Blair JE, Venturi ML, Shoe JL
BMC Evol Biol 2004 Jan 28 4:2 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 31 Mar 2004

Ecological adaptation during incipient speciation revealed by precise gene replacement.
Greenberg AJ, Moran JR, Coyne JA, Wu CI
Science 2003 Dec 5 302(5651):1754-7 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 22 Dec 2003

Interactions among mechanisms of sexual selection on male body size and head shape in a sexually dimorphic fly.
Bonduriansky R, Rowe L
Evolution Int J Org Evolution 2003 Sep 57(9):2046-53 [abstract on PubMed] [related articles] [order article]
Selected by | John True
Evaluated 6 Nov 2003

Rapid evolution of male-biased gene expression in Drosophila.
Meiklejohn CD, Parsch J, Ranz JM, Hartl DL
Proc Natl Acad Sci U S A 2003 Aug 19 100(17):9894-9 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 13 Oct 2003

Conflicting phylogenetic signals at the base of the metazoan tree.
Rokas A, King N, Finnerty J, Carroll SB
Evol Dev 2003 Jul-Aug 5(4):346-59 [abstract on PubMed] [related articles] [order article]
Selected by | John True
Evaluated 24 Jul 2003

Phylogenetic signal in the song of crests and kinglets (Aves: Regulus).
Päckert M, Martens J, …, Nazarenko AA, Veith M
Evolution Int J Org Evolution 2003 Mar 57(3):616-29 [abstract on PubMed] [related articles] [order article]
Selected by | John True
Evaluated 16 Jul 2003

Mimicry: developmental genes that contribute to speciation.
Naisbit RE, Jiggins CD, Mallet J
Evol Dev 2003 May-Jun 5(3):269-80 [abstract on PubMed] [related articles] [order article]
Selected by | John True
Evaluated 16 Jul 2003

Different cell size and cell number contribution in two newly established and one ancient body size cline of Drosophila subobscura.
Calboli FC, Gilchrist GW, Partridge L
Evolution Int J Org Evolution 2003 Mar 57(3):566-73 [abstract on PubMed] [related articles] [order article]
Selected by | John True
Evaluated 24 Apr 2003

Genetic biases for showy males: are some genetic systems especially conducive to sexual selection?
Reeve HK, Pfennig DW
Proc Natl Acad Sci U S A 2003 Feb 4 100(3):1089-94 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 24 Apr 2003

Genetics of a difference in pigmentation between Drosophila yakuba and Drosophila santomea.
Llopart A, Elwyn S, Lachaise D, Coyne JA
Evolution Int J Org Evolution 2002 Nov 56(11):2262-77 [abstract on PubMed] [related articles] [order article]
Selected by | John True
Evaluated 28 Feb 2003

tan and ebony genes regulate a novel pathway for transmitter metabolism at fly photoreceptor terminals.
Borycz J, Borycz JA, Loubani M, Meinertzhagen IA
J Neurosci 2002 Dec 15 22(24):10549-57 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 15 Jan 2003

Sperm-female coevolution in Drosophila.
Miller GT, Pitnick S
Science 2002 Nov 8 298(5596):1230-3 [abstract on PubMed] [related articles] [FREE full text]
Selected by | John True
Evaluated 3 Dec 2002

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