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Vivian Irish
Department of Molecular, Cellular and Developmental Biology, Yale University, New Haven, United States of America

Faculty Member: Developmental Biology > Developmental Evolution [ since 29 June 2001 ]
[ Evaluations ]
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Evaluations

Natural variation in leaf morphology results from mutation of a novel KNOX gene.
Kimura S, Koenig D, …, Yoong FY, Sinha N
Curr Biol 2008 May 6 18(9):672-7 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Michael Lenhard / Vivian Irish
Evaluated 12 Jun 2008

Scent evolution in Chinese roses.
Scalliet G, Piola F, …, Cock JM, Hugueney P
Proc Natl Acad Sci U S A 2008 Apr 15 105(15):5927-32 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Vivian Irish
Evaluated 14 May 2008

Coordinated regulation of Arabidopsis thaliana development by light and gibberellins.
Feng S, Martinez C, …, Fan LM, Deng XW
Nature 2008 Jan 24 451(7177):475-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Julin Maloof / Vivian Irish / Tai-ping Sun
Evaluated 11 Feb 2008

A conserved microRNA module exerts homeotic control over Petunia hybrida and Antirrhinum majus floral organ identity.
Cartolano M, Castillo R, …, Schwarz-Sommer Z, Vandenbussche M
Nat Genet 2007 Jul 39(7):901-5 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Robert Sablowski / Guenter Theissen / Rüdiger Simon / Vivian Irish
Evaluated 9 Aug 2007

The heterochronic maize mutant Corngrass1 results from overexpression of a tandem microRNA.
Chuck G, Cigan AM, Saeteurn K, Hake S
Nat Genet 2007 Apr 39(4):544-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Vivian Irish
Evaluated 25 Apr 2007

Termination of asymmetric cell division and differentiation of stomata.
Pillitteri LJ, Sloan DB, Bogenschutz NL, Torii KU
Nature 2007 Feb 1 445(7127):501-5 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | David Smyth / Vivian Irish / Liam Dolan
Evaluated 22 Mar 2007

Transcription factor control of asymmetric cell divisions that establish the stomatal lineage.
MacAlister CA, Ohashi-Ito K, Bergmann DC
Nature 2007 Feb 1 445(7127):537-40 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | David Smyth / Vivian Irish / Liam Dolan
Evaluated 22 Mar 2007

Variation in the epigenetic silencing of FLC contributes to natural variation in Arabidopsis vernalization response.
Shindo C, Lister C, …, Nordborg M, Dean C
Genes Dev 2006 Nov 15 20(22):3079-83 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Vivian Irish
Evaluated 21 Feb 2007

Genome-wide high-resolution mapping and functional analysis of DNA methylation in arabidopsis.
Zhang X, Yazaki J, …, Jacobsen SE, Ecker JR
Cell 2006 Sep 22 126(6):1189-201 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Sui Huang / Craig Pikaard / Xing Wang Deng / Frank Lyko / Eric Selker / Vivian Irish / Motoaki Seki
Evaluated 13 Oct 2006

The genetic basis for differences in leaf form between Arabidopsis thaliana and its wild relative Cardamine hirsuta.
Hay A, Tsiantis M
Nat Genet 2006 Aug 38(8):942-7 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Vivian Irish / Keith Davis
Evaluated 18 Aug 2006

The transcription factor FLC confers a flowering response to vernalization by repressing meristem competence and systemic signaling in Arabidopsis.
Searle I, He Y, …, Amasino RA, Coupland G
Genes Dev 2006 Apr 1 20(7):898-912 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Vivian Irish
Evaluated 11 May 2006

DEMETER DNA glycosylase establishes MEDEA polycomb gene self-imprinting by allele-specific demethylation.
Gehring M, Huh JH, …, Goldberg RB, Fischer RL
Cell 2006 Feb 10 124(3):495-506 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Wolf Reik / Vivian Irish / Philip Benfey
Evaluated 22 Mar 2006

The origin of the naked grains of maize.
Wang H, Nussbaum-Wagler T, …, Lukens L, Doebley JF
Nature 2005 Aug 4 436(7051):714-9 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Arp Schnittger / Vivian Irish
Evaluated 2 Sep 2005

Integration of spatial and temporal information during floral induction in Arabidopsis.
Wigge PA, Kim MC, …, Lohmann JU, Weigel D
Science 2005 Aug 12 309(5737):1056-9 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Kay Schneitz / Vivian Irish / Richard M. Amasino / Elena Alvarez-Buylla
Evaluated 31 Aug 2005

FD, a bZIP protein mediating signals from the floral pathway integrator FT at the shoot apex.
Abe M, Kobayashi Y, …, Goto K, Araki T
Science 2005 Aug 12 309(5737):1052-6 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Julia Kehr / Kay Schneitz / Vivian Irish / Richard M. Amasino
Evaluated 31 Aug 2005

The F-box protein TIR1 is an auxin receptor.
Dharmasiri N, Dharmasiri S, Estelle M
Nature 2005 May 26 435(7041):441-5 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patrick Masson / Yunde Zhao / Tai-ping Sun / Philip Benfey / Vivian Irish / Wolf B. Frommer / Emmanuel Liscum
Evaluated 10 Jun 2005

The Arabidopsis F-box protein TIR1 is an auxin receptor.
Kepinski S, Leyser O
Nature 2005 May 26 435(7041):446-51 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Patrick Masson / Yunde Zhao / Tai-ping Sun / Philip Benfey / Vivian Irish / Wolf B. Frommer / Seth J Davis / Emmanuel Liscum
Evaluated 10 Jun 2005

RNA polymerase IV directs silencing of endogenous DNA.
Herr AJ, Jensen MB, Dalmay T, Baulcombe DC
Science 2005 Apr 1 308(5718):118-20 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Vivian Irish / Daniel Gallie / Thomas Jenuwein
Evaluated 3 May 2005

Plant nuclear RNA polymerase IV mediates siRNA and DNA methylation-dependent heterochromatin formation.
Onodera Y, Haag JR, …, Pontes O, Pikaard CS
Cell 2005 Mar 11 120(5):613-22 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Daniel Reines / Frank Lyko / Sui Huang / Lucio Comai / Vivian Irish / Motoaki Seki
Evaluated 3 May 2005

Positional signaling mediated by a receptor-like kinase in Arabidopsis.
Kwak SH, Shen R, Schiefelbein J
Science 2005 Feb 18 307(5712):1111-3 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Philip Benfey / Sheila McCormick / Liam Dolan / Vivian Irish / Robert Sablowski
Evaluated 28 Feb 2005

The bHLH genes GL3 and EGL3 participate in an intercellular regulatory circuit that controls cell patterning in the Arabidopsis root epidermis.
Bernhardt C, Zhao M, …, Lloyd A, Schiefelbein J
Development 2005 Jan 132(2):291-8 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Michael Lenhard / Vivian Irish
Evaluated 28 Feb 2005

MicroRNA binding sites in Arabidopsis class III HD-ZIP mRNAs are required for methylation of the template chromosome.
Bao N, Lye KW, Barton MK
Dev Cell 2004 Nov 7(5):653-62 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Miltos Tsiantis / Marjori Matzke / Vivian Irish / Robert Sablowski
Evaluated 28 Jan 2005

Mechanisms regulating SHORT-ROOT intercellular movement.
Gallagher KL, Paquette AJ, Nakajima K, Benfey PN
Curr Biol 2004 Oct 26 14(20):1847-51 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Vivian Irish
Evaluated 7 Dec 2004

PETAL LOSS, a trihelix transcription factor gene, regulates perianth architecture in the Arabidopsis flower.
Brewer PB, Howles PA, …, Kilinc A, Smyth DR
Development 2004 Aug 131(16):4035-45 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Gwyneth Ingram / Vivian Irish
Evaluated 24 Sep 2004

Vernalization in Arabidopsis thaliana is mediated by the PHD finger protein VIN3.
Sung S, Amasino RM
Nature 2004 Jan 8 427(6970):159-64 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Vivian Irish / Detlef Weigel / Seth J Davis / Thomas Jenuwein
Evaluated 2 Feb 2004

EIN3-dependent regulation of plant ethylene hormone signaling by two arabidopsis F box proteins: EBF1 and EBF2.
Potuschak T, Lechner E, …, Koncz C, Genschik P
Cell 2003 Dec 12 115(6):679-89 [abstract on PubMed] [related articles] [order article]
Selected by | Thierry Gaude / Jen Sheen / Vivian Irish / Arp Schnittger
Evaluated 27 Jan 2004

Plant responses to ethylene gas are mediated by SCF(EBF1/EBF2)-dependent proteolysis of EIN3 transcription factor.
Guo H, Ecker JR
Cell 2003 Dec 12 115(6):667-77 [abstract on PubMed] [related articles] [order article]
Selected by | Jen Sheen / Vivian Irish / Caren Chang / Arp Schnittger
Evaluated 27 Jan 2004

A gene-coexpression network for global discovery of conserved genetic modules.
Stuart JM, Segal E, Koller D, Kim SK
Science 2003 Oct 10 302(5643):249-55 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jose Luis Riechmann / Susan Mango / Vivian Irish / Laurence Rahme
Evaluated 24 Oct 2003

Control of leaf morphogenesis by microRNAs.
Palatnik JF, Allen E, …, Carrington JC, Weigel D
Nature 2003 Sep 18 425(6955):257-63 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Tai-ping Sun / Javier Paz-Ares / Carl Thummel / Vivian Irish / David Smyth / Philip Benfey / Jen Sheen
Evaluated 15 Oct 2003

Genetic mechanisms and constraints governing the evolution of correlated traits in drosophilid flies.
Gompel N, Carroll SB
Nature 2003 Aug 21 424(6951):931-5 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Vivian Irish
Evaluated 10 Sep 2003

The Polycomb-group protein MEDEA regulates seed development by controlling expression of the MADS-box gene PHERES1.
Köhler C, Hennig L, …, Gruissem W, Grossniklaus U
Genes Dev 2003 Jun 15 17(12):1540-53 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Michael Lenhard / David Smyth / Guenter Theissen / John Bowman / Elena Alvarez-Buylla / Vivian Irish / Robert Sablowski
Evaluated 13 Aug 2003

Molecular analysis of the LATERAL SUPPRESSOR gene in Arabidopsis reveals a conserved control mechanism for axillary meristem formation.
Greb T, Clarenz O, …, Schmitz G, Theres K
Genes Dev 2003 May 1 17(9):1175-87 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Jan Traas / Vivian Irish / David Smyth
Evaluated 18 Jun 2003

Accumulation of phosphorylated repressor for gibberellin signaling in an F-box mutant.
Sasaki A, Itoh H, …, Ashikari M, Matsuoka M
Science 2003 Mar 21 299(5614):1896-8 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Vivian Irish
Evaluated 30 Apr 2003

Two RNA binding proteins, HEN4 and HUA1, act in the processing of AGAMOUS pre-mRNA in Arabidopsis thaliana.
Cheng Y, Kato N, …, Li J, Chen X
Dev Cell 2003 Jan 4(1):53-66 [abstract on PubMed] [related articles] [order article]
Selected by | Vivian Irish / Elena Alvarez-Buylla / Detlef Weigel
Evaluated 26 Feb 2003

ROS1, a repressor of transcriptional gene silencing in Arabidopsis, encodes a DNA glycosylase/lyase.
Gong Z, Morales-Ruiz T, …, David L, Zhu JK
Cell 2002 Dec 13 111(6):803-14 [abstract on PubMed] [related articles] [order article]
Selected by | Vivian Irish / Marjori Matzke / Motoaki Seki
Evaluated 23 Jan 2003

SPLAYED, a novel SWI/SNF ATPase homolog, controls reproductive development in Arabidopsis.
Wagner D, Meyerowitz EM
Curr Biol 2002 Jan 22 12(2):85-94 [abstract on PubMed] [related articles] [order article]
Selected by | Eric Lam / Vivian Irish
Evaluated 14 Mar 2002

SEUSS, a member of a novel family of plant regulatory proteins, represses floral homeotic gene expression with LEUNIG.
Franks RG, Wang C, Levin JZ, Liu Z
Development 2002 Jan 129(1):253-63 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Vivian Irish
Evaluated 14 Mar 2002

The tomato Blind gene encodes a MYB transcription factor that controls the formation of lateral meristems.
Schmitz G, Tillmann E, …, Cellini F, Theres K
Proc Natl Acad Sci U S A 2002 Jan 22 99(2):1064-9 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Vivian Irish
Evaluated 14 Mar 2002

Auxin regulates SCF(TIR1)-dependent degradation of AUX/IAA proteins.
Gray WM, Kepinski S, …, Leyser O, Estelle M
Nature 2001 Nov 15 414(6861):271-6 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Vivian Irish / Emmanuel Liscum / Robert Sablowski
Evaluated 21 Dec 2001

Brachypodium distachyon. A new model system for functional genomics in grasses.
Draper J, Mur LA, …, Hasterok R, Routledge AP
Plant Physiol 2001 Dec 127(4):1539-55 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Andy Pereira / Vivian Irish / Detlef Weigel
Evaluated 21 Dec 2001

Two-component circuitry in Arabidopsis cytokinin signal transduction.
Hwang I, Sheen J
Nature 2001 Sep 27 413(6854):383-9 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | John Bowman / Vivian Irish
Evaluated 25 Oct 2001

Intercellular movement of the putative transcription factor SHR in root patterning.
Nakajima K, Sena G, Nawy T, Benfey PN
Nature 2001 Sep 20 413(6853):307-11 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Detlef Weigel / Jan Traas / Elizabeth Kellogg / Andrea Barta / Vivian Irish / John Bowman / Frederic Berger / Hiroo Fukuda / Don McCarty
Evaluated 23 Oct 2001

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