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Michael Yarus
Department of Molecular, Celluar and Developmental Biology, University of Colorado at Boulder, Boulder, United States of America

Faculty Member: Cell Biology > Control of Gene Expression [ since 25 July 2001 ]
[ Evaluations ]
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Evaluations

Extreme accumulation of nucleotides in simulated hydrothermal pore systems.
Baaske P, Weinert FM, …, Russell MJ, Braun D
Proc Natl Acad Sci U S A 2007 May 29 104(22):9346-51 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Michael Yarus
Evaluated 19 May 2008

Hidden layers of human small RNAs.
Kawaji H, Nakamura M, …, Carninci P, Hayashizaki Y
BMC Genomics 2008 Apr 10 9(1):157 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Michael Yarus
Evaluated 16 Apr 2008

Permuted tRNA genes expressed via a circular RNA intermediate in Cyanidioschyzon merolae.
Soma A, Onodera A, …, Kawamura F, Sekine Y
Science 2007 Oct 19 318(5849):450-3 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Richard Maraia / Michael Yarus / Hisako Ohtsubo
Evaluated 30 Oct 2007

An intact ribose moiety at A2602 of 23S rRNA is key to trigger peptidyl-tRNA hydrolysis during translation termination.
Amort M, Wotzel B, …, Micura R, Polacek N
Nucleic Acids Res 2007 35(15):5130-40 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Michael Yarus
Evaluated 22 Aug 2007

The structural basis of ribozyme-catalyzed RNA assembly.
Robertson MP, Scott WG
Science 2007 Mar 16 315(5818):1549-53 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Robert Batey / Thorsten Dieckmann / Burckhard Seelig / Michael Yarus / Douglas Turner
Evaluated 29 Mar 2007

Endonucleolytic cleavage of eukaryotic mRNAs with stalls in translation elongation.
Doma MK, Parker R
Nature 2006 Mar 23 440(7083):561-4 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Lynne Maquat / Michael Yarus / Miles Wilkinson
Evaluated 4 Apr 2006

A DNA-templated aldol reaction as a model for the formation of pentose sugars in the RNA world.
Oberhuber M, Joyce GF
Angew Chem Int Ed Engl 2005 Nov 25 44(46):7580-3 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Peter Unrau / Michael Yarus
Evaluated 3 Apr 2006

General deoxyribozyme-catalyzed synthesis of native 3'-5' RNA linkages.
Purtha WE, Coppins RL, Smalley MK, Silverman SK
J Am Chem Soc 2005 Sep 28 127(38):13124-5 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Michael Yarus
Evaluated 19 Oct 2005

A ribozyme for the aldol reaction.
Fusz S, Eisenführ A, …, Heckel A, Famulok M
Chem Biol 2005 Aug 12(8):941-50 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Niles Lehman / Michael Yarus / Andres Jaschke
Evaluated 5 Oct 2005

Unusually short RNA sequences: design of a 13-mer RNA that selectively binds and recognizes theophylline.
Anderson PC, Mecozzi S
J Am Chem Soc 2005 Apr 20 127(15):5290-1 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Scott K. Silverman / Burckhard Seelig / Michael Yarus
Evaluated 12 Jul 2005

Semipermeable lipid bilayers exhibit diastereoselectivity favoring ribose.
Sacerdote MG, Szostak JW
Proc Natl Acad Sci U S A 2005 Apr 26 102(17):6004-8 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Michael Yarus
Evaluated 14 Jun 2005

Engineering a ligand-dependent RNA transcriptional activator.
Buskirk AR, Landrigan A, Liu DR
Chem Biol 2004 Aug 11(8):1157-63 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Michael Yarus
Evaluated 19 Nov 2004

Ligation activity of fragmented ribozymes in frozen solution: implications for the RNA world.
Vlassov AV, Johnston BH, Landweber LF, Kazakov SA
Nucleic Acids Res 2004 32(9):2966-74 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Michael Yarus
Evaluated 16 Jun 2004

Nonreplicative homologous RNA recombination: promiscuous joining of RNA pieces?
Gmyl AP, Korshenko SA, …, Khitrina EV, Agol VI
RNA 2003 Oct 9(10):1221-31 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Michael Yarus / Eugene Koonin
Evaluated 9 Jan 2004

Generalized RNA-directed recombination of RNA.
Riley CA, Lehman N
Chem Biol 2003 Dec 10(12):1233-43 [abstract on PubMed] [related articles] [order article]
Selected by | Michael Yarus
Evaluated 8 Jan 2004

An alcohol dehydrogenase ribozyme.
Tsukiji S, Pattnaik SB, Suga H
Nat Struct Biol 2003 Sep 10(9):713-7 [abstract on PubMed] [related articles] [full text] [order article]
Selected by | Michael Yarus / Burckhard Seelig / John Burke
Evaluated 21 Aug 2003

Riboswitches control fundamental biochemical pathways in Bacillus subtilis and other bacteria.
Mandal M, Boese B, …, Winkler WC, Breaker RR
Cell 2003 May 30 113(5):577-86 [abstract on PubMed] [related articles] [order article]
Selected by | Elizabeth Gavis / Michael Yarus
Evaluated 16 Jun 2003

Cryo-EM reveals an active role for aminoacyl-tRNA in the accommodation process.
Valle M, Sengupta J, …, Agrawal RK, Frank J
EMBO J 2002 Jul 1 21(13):3557-67 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Michael Yarus / Venki Ramakrishnan
Evaluated 29 Aug 2002

Sequence requirements for terminators and antiterminators in the T box transcription antitermination system: disparity between conservation and functional requirements.
Grundy FJ, Moir TR, Haldeman MT, Henkin TM
Nucleic Acids Res 2002 Apr 1 30(7):1646-55 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Michael Yarus
Evaluated 26 Jun 2002

23S rRNA assisted folding of cytoplasmic malate dehydrogenase is distinctly different from its self-folding.
Sanyal SC, Pal S, …, DasGupta C, Chaudhuri S
Nucleic Acids Res 2002 Jun 1 30(11):2390-7 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Michael Yarus
Evaluated 26 Jun 2002

The use of mRNA display to select high-affinity protein-binding peptides.
Wilson DS, Keefe AD, Szostak JW
Proc Natl Acad Sci U S A 2001 Mar 27 98(7):3750-5 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Michael Yarus
Evaluated 25 Mar 2002

Bacterial polypeptide release factor RF2 is structurally distinct from eukaryotic eRF1.
Vestergaard B, Van LB, …, Buckingham RH, Kjeldgaard M
Mol Cell 2001 Dec 8(6):1375-82 [abstract on PubMed] [related articles] [order article]
Selected by | Michael Yarus / Venki Ramakrishnan
Evaluated 14 Mar 2002

Identification of novel small RNAs using comparative genomics and microarrays.
Wassarman KM, Repoila F, …, Storz G, Gottesman S
Genes Dev 2001 Jul 1 15(13):1637-51 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Michael Yarus
Evaluated 3 Dec 2001

A conserved RNA structure (thi box) is involved in regulation of thiamin biosynthetic gene expression in bacteria.
Miranda-Ríos J, Navarro M, Soberón M
Proc Natl Acad Sci U S A 2001 Aug 14 98(17):9736-41 [abstract on PubMed] [related articles] [FREE full text]
Selected by | Lynne Maquat / Tina Henkin / Michael Yarus
Evaluated 28 Nov 2001

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